Changelog¶
v0.8.1 (2025-07-31)¶
Fixed bugs:
- check only emmo terms #851
Closed issues:
- Add possibility of specifying IRI in new_class etc. #843
- How to access metadata such as abstract and creators? #841
Merged pull requests:
- Recursive creation of squashed ontologies #869 (jesper-friis)
- Deprecate support for python 3.8 #868 (francescalb)
- Added
--namespace
option toontoconvert
#867 (jesper-friis) - Handle timeout errors in redirectioncheck #864 (jesper-friis)
- move from sintef/ci-cd safety to safety own setup #854 (francescalb)
- Emmocheck now does not check prefLabel for any of entities specific prefixes #852 (francescalb)
- Made metadata repr easier to read. #847 (jesper-friis)
- Update Metadata so that all metadata-items can be accessed #845 (francescalb)
- Added possibility of specifying iri in new_entity #844 (francescalb)
v0.8.0 (2025-03-18)¶
Merged pull requests:
- Update to emmo 1.0.0 as it is now released #839 (francescalb)
- Updated to include python3.13 #831 (francescalb)
v0.7.3 (2025-03-12)¶
Closed issues:
- Loading non-emmo-related ontologies #811
- The test for load_foaf is bypassed. #797
- Explicitly support Python 3.12 #763
- Update to emmo-beta5 #680
Merged pull requests:
- Ignore automatic dependency updates Python3.8 #830 (francescalb)
- Minor fix for fact++ #817 (jesper-friis)
- Importing rdfs schemas #814 (francescalb)
- Updated sync_reasoner() such that it works for FaCT++ #810 (jesper-friis)
- Updated emmocheck to ahead to latest formulation of units #809 (jesper-friis)
- Added find() method #807 (jesper-friis)
- Added utils.get_datatype_class() #804 (jesper-friis)
- Added test_unit_dimension_rc1() #798 (jesper-friis)
- Corrected test when loading rdfs. It used type for is_a. #796 (francescalb)
- Handle owlready2:python_names in genated triples in excelparser #795 (francescalb)
- Added figures to generated documentation #767 (jesper-friis)
v0.7.2 (2024-10-25)¶
Closed issues:
- excelparser, allow for = in strings for other annotations. #751
- Add options to ontoconvert for adding annotations expected by FOOPS #728
- Remove or rename "old" version tags #547
Merged pull requests:
- Corrected publishing info #792 (francescalb)
- Flb/trusted publisher on pypi #791 (francescalb)
- Updated to owlready2==0.44 #780 (francescalb)
- Added release_pat secret to ci_cd_updated_master workflow #777 (francescalb)
- Added test for descriptions #766 (jesper-friis)
- Fixed failing test_save in master #756 (jesper-friis)
- Added possibility for = in extra annotations defined in excelparser #752 (francescalb)
- Load doamin-battery instead of battinfo which is just an extra wrapping #745 (francescalb)
- Rewriting ontodoc based on domain-battery #742 (jesper-friis)
- Make it possible to run HermiT on EMMO #740 (jesper-friis)
- Added minor fixes for ontoconvert #739 (jesper-friis)
- Added additional recognised prefixes #734 (jesper-friis)
- Copy EMMO annotations #733 (jesper-friis)
- Add --copy-annotation option to ontoconvert #732 (jesper-friis)
- Updated list of IRIs to ignore when checking prefLabel #731 (jesper-friis)
v0.7.1 (2024-02-29)¶
v0.7.0.1 (2024-02-29)¶
Closed issues:
- Implement ontoconvert --base-iri argument #716
Merged pull requests:
- Added
yield from
#720 (jesper-friis) - Correct saving squashed ontology #719 (jesper-friis)
- Updated ontoconvert help #715 (jesper-friis)
v0.7.0 (2024-01-26)¶
Merged pull requests:
- Ontology copy #711 (francescalb)
- Update save recursive and layout #710 (francescalb)
v0.6.3 (2024-01-25)¶
Merged pull requests:
- Fix infinite recursion in directory layout #708 (jesper-friis)
- Ensure that saving with squash removes all but current ontology #707 (jesper-friis)
- Turned on directory layout tests for emmo and made them pytest #706 (francescalb)
v0.6.2 (2024-01-23)¶
Merged pull requests:
- Allow controling ontology IRI when saving #700 (jesper-friis)
v0.6.1 (2024-01-18)¶
Closed issues:
- No tests for ontology.save #684
- Allow using HermiT from ontoconvert #664
- PrefLabel used by new_entity, and get_by_label even if it is not in the ontology #642
- ontology(imported=True) returns all classes in world #640
- excel2onto example doesn't come into the github pages documentation #626
- owlready2 > 0.41 fails #624
- get_by_label and get_by_label all force add label_annotations #621
Merged pull requests:
- Avoid infinite recursion in set_common_prefix() #701 (jesper-friis)
- Updated the getattr patch #699 (jesper-friis)
- WIP: Fix issues with changed IRIs effecting test_excelparser #697 (jesper-friis)
- Added directory_layout() function #696 (jesper-friis)
- Added redirection checking tool #695 (jesper-friis)
- Add test save #686 (francescalb)
- Update test_unit_dimension in emmocheck to EMMO 1.0.0-beta5 #678 (jesper-friis)
- Skip checking dimensional units for domain ontologies that doesn't load this class. #677 (jesper-friis)
- HermiT is default reasoner. #671 (francescalb)
- Ci/dependabot updates #662 (francescalb)
- Updated emmocheck to new EMMO quantities and units #658 (jesper-friis)
- Update README.md #657 (jesper-friis)
- Corrected bug so that asking for entities in imported does not return all in world #655 (francescalb)
- Corrected get_by_label to use only labels in the ontology #643 (francescalb)
- Update to comply with owlready2>0.41 #639 (francescalb)
- Ontodoc example in documentation #630 (francescalb)
v0.6.0 (2023-06-19)¶
Closed issues:
- pyparsing has been updated #629
Merged pull requests:
- Check prefLabels in imported ontologies only if asked for. #628 (francescalb)
v0.5.4 (2023-06-15)¶
v0.5.3.2 (2023-06-15)¶
Merged pull requests:
- remove warnings_as_errors in cd workflow introduced in 0.5.3 #625 (francescalb)
v0.5.3.1 (2023-06-12)¶
v0.5.3 (2023-06-12)¶
Closed issues:
- Extend new_entity to include properties #609
- Add support for Python 3.11 #599
- excelparser - enable object properties creation #587
- If there are altLabels that match, get_by_label_all returns only the prefLabels. #511
- excel2onto: implement other annotations #462
Merged pull requests:
- default_annotations no longer forced in get_by_label #623 (francescalb)
- Updated documentation and excel sheet in example. #622 (francescalb)
- Flb/excel2onto properties #620 (francescalb)
- Fixed failing tests in test_patch.py #618 (jesper-friis)
- Add test for Python 3.11 and support it officially #615 (jesper-friis)
- Added doctest #614 (jesper-friis)
- Item access to classes #613 (jesper-friis)
- Change ontology.new_entity to also allow adding properties #610 (francescalb)
- Added DOI badge #606 (jesper-friis)
v0.5.2 (2023-05-24)¶
Fixed bugs:
- Auto-merge dependabot PRs workflow invalid #566
Closed issues:
- Point to excelparser api from the tools-page #593
- BUG: pytest - missing remote file /0.5.0/electrochemicalquantities / ontology #589
- Owlready 0.41 support ? #588
- Allow space in labels #583
- is_defined needs a better description #563
- utils line 112 in get_iri_name link = "{lowerlabel}" vs "{label}" #562
- ontograph - update colour deafults #559
- ontograph - argument leafs should be leaves #558
- ontograph - write out more examples on how to use it #557
- ontograph --parents not working #556
- test_graph2 is failing #555
- Add client side redirection in generated html documentation #552
- Typos in PR template #523
- ontograph, read format from name #497
Merged pull requests:
- Add links to the original FaCT++ repo, GitHub profiles, etc. #600 (blokhin)
- Added test update to PR template. #598 (jesper-friis)
- Changed
is_defined
into a ThingClass property and improved its documentation. #597 (jesper-friis) - Added link to excelparser from tools for documentation of excel sheet. #594 (francescalb)
- Bump SINTEF/ci-cd from 2.3.0 to 2.3.1 #584 (dependabot[bot])
- Updated get_by_label() so that it now accepts label, name and full iri #582 (jesper-friis)
- Added two additional exceptions to emmocheck #577 (jesper-friis)
- Bump SINTEF/ci-cd from 2.2.1 to 2.3.0 #575 (dependabot[bot])
- get_ancestors and get_descendants have the same arguments. #572 (francescalb)
- Bump SINTEF/ci-cd from 2.2.0 to 2.2.1 #571 (dependabot[bot])
- ontograph: colour updates, examples, bugfix #569 (francescalb)
- Bump SINTEF/ci-cd from 2.1.0 to 2.2.0 #567 (dependabot[bot])
- Changed argument leafs to leaves, with deprecation warning in ontograph #564 (francescalb)
- Corrected bug on getting default relation style. #561 (francescalb)
- Fix internal links in generated documentation generated with ontodoc #548 (jesper-friis)
v0.5.1 (2023-02-07)¶
Fixed bugs:
Merged pull requests:
- Use SINTEF/ci-cd v2.1.0 in CI/CD workflows #546 (CasperWA)
- Revert version to v0.5.0 #544 (CasperWA)
- Fix ontodoc for bigmap #543 (jesper-friis)
v0.5.0 (2023-02-06)¶
Fixed bugs:
LegacyVersion
does not exist inpackaging.version
#540- ontodoc: Expect
is_instance_of
property to be iterable #506 - Reinstate
images/material.png
#495
Closed issues:
- Newest pylint (2.15.4) has intriduced some new rules. #534
- sync_attributes according to emmo convention regenerates a new iri even if it already has a valid one #525
- Remove dependency on LegacyVersion of packaging #514
- pytests are importing packaging 22.0 even though it is not allowed in requirements #513
- ontodoc: adding annotations that are not strings fail #510
- get_by_label_all only works after sync_attributes #502
- excel2onto: support updating ontology #501
- excel2onto: allow to use prefLabel already in imported ontologies #500
- Drop Python 3.6 support - extend Python >3.7 support #486
- Update pypi-release github action #482
- Make workflows dispatchable #481
- excel2onto: Read catalog file for imported ontology #474
- Give option to write_catalog for writing relative paths #473
- excel2onto: add choice of prefix for imported ontologies #467
v0.4.0 (2022-10-04)¶
Fixed bugs:
- Update repo files with new repo name #479
- Pre-commit hook
bandit
failing #478 - Fix publish/release workflow #476
- excel2onto: not all relations are included in the generated ontology #457
- Unexpected behaviour of get_unabbreviated_triples() #454
Closed issues:
- excel2onto: restrictions does not allow for using "emmo:hasProcessOutput some xx" #464
- EMMO is updated to beta4, and now documentation fails #440
- some ObjectProperties from EMMO-beta-4.0 cause errors in OntoGraph #429
- Excelparser does not write catalog file correctly #421
v0.3.1 (2022-05-08)¶
v0.3.0 (2022-05-05)¶
v0.2.0 (2022-03-02)¶
v0.1.3 (2021-10-27)¶
v0.1.2 (2021-10-27)¶
v0.1.1 (2021-10-27)¶
v0.1.0 (2021-10-27)¶
* This Changelog was automatically generated by github_changelog_generator